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 table tools

newInteractoin analysis
 functional analysis
 basic graph visualization
 cluster analysis
 data mining
 sequence tools
 annotaion tools
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Correlation analysis between groups
Show the pairwise correlation of all elements between two tables
Members Only
Correlation analysis within group
Calculate the pairwise correlation of all elements in the table
Members Only
Letter identification column chart
Multiple comparisons were used to analyze differences between groups, and the degree of difference was indicated by letters.
5
paired differential expression analysis
Find out differential expression genes via edgeR based on paired relationship
10
paired t test
This tool is used to estimate whether two groups have significant difference via ttest based on paired relationship.
5
box_mul_sig
Ttest and rank sum test were performed between multiple groups of samples, and a box plot was drawn. Significant differences between groups marked wi
5
box_two_sig
T test and rank sum test were performed between the two groups of samples, and a box plot was drawn. Significant differences were marked between the
5
tSNE
Reduce multiple samples to twodimensional plane via the nonlinear reduction model. Not available for singcell data for the moment.
5
Significance marker difference analysis（Multiple g
Ttest and rank sum test were performed between multiple groups of samples, and significant differences between groups marked with significant differe
5
Significance marker difference analysis（Two groups
T test and rank sum test were performed between the two groups of samples, and significant differences were marked between the groups.
5
plantTFdb_annotation
align nucleic acid or protein sequence to plantTFdb to predicte TF families
1200
AnimalTFDB annotation
align nucleic acid or protein sequences to animalTFBD to predicte TF families
1200
SwissProt annotation
align the query sequences to the SwissProt protein database to obtain functional annotations
1800
Pathway Enrichment Analysis
Pathway enrichment analysis in given gene sets comparing to the genome background.
30
rank_sum_test
this tool determine if two groups of data are significantly different from each other
5
GO enrichment analysis
Analyze GO terms that significantly enriched in a given gene set comparing to the genome background.
30
roc
ROC curve, is a graphical plot that illustrates the diagnostic ability of a binary classifier system(e.g. biomarker)
5
Differential metabolites analysis
Differential metabolites analysis tool is used to screen out differential metabolites between two groups of samples.
5
OSGO
Plotting GO (gene ontology) annotations (the second level) in three GO ontologies from one or more groups of data.
5
Decoding SAM flag
Identify the properties of a read based on its SAM flag value or obtain a SAM flag value based on the reads properties.
0
Linear Regression plot
Plotting the relationship between a scalar dependent variable y and one explanatory variable x.
2
Differential Expression Analysis
Find out differentially expressed genes between two groups of data.
10
Threedimension PCA
Convert linearly massive variables into several important variables and draw a threedimension score plot.
5
Senior Scatter Plot
Demonstrate file data in a scatter plot with auxiliary lines and correlation coefficient.
5
GO enrichment analysis
Analyze GO terms that significantly enriched in a given gene set comparing to the genome background.
15
Pathway Enrichment Analysis
Pathway enrichment analysis in given gene sets comparing to the genome background.
15
Frequency Histogram
Demonstrate the frequency distribution of file data in a frequency histogram.
2
Twodimension PCA
Convert linearly massive variables into several important variables and draw a twodimension score plot.
10
BLASTTwo Sequences Alignment
Local alignment between two sequences to measure their similarity
5
CDS2protein
Translating CDS to protein according to the Standard Code (transl_table=1) or the Bacterial, Archaeal and Plant Plastid Code (transl_table=11)
2
Multiple tables merging
Merging more than two tables according to the merging type and default value.
2